BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F03LP1|AL425726
(739 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig666 1404 0.0
>3x_Contig666
Length = 2037
Score = 1404 bits (707), Expect = 0.0
Identities = 731/739 (98%), Gaps = 1/739 (0%)
Strand = Plus / Minus
Query: 1 gatataacaatgacawacaaatgagaaagttccttaaaagaagcagttgaaaagcttaat 60
||||| ||||||||| |||||||||||||||||| || |||||||||||||||||||||
Sbjct: 981 gatatgacaatgacattcaaatgagaaagttccttgaa-gaagcagttgaaaagcttaat 923
Query: 61 cttctcttcwcttgaaaaaaaattcataatacgtggcataatcttgatacctttgtcgaa 120
||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 cttctcttctcttgacaagaaattcataatacgtggcataatcttgatacctttgtcgaa 863
Query: 121 agataagatggaaatgaagggagaaacgtcaaaaccgtggtcctcaacgtgtagcgcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 agataagatggaaatgaagggagaaacgtcaaaaccgtggtcctcaacgtgtagcgcctc 803
Query: 181 ccataattttgaactgtccggctgttgaccggatctcaattgagcttctagttcaagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ccataattttgaactgtccggctgttgaccggatctcaattgagcttctagttcaagcac 743
Query: 241 ttcttcgtaaacagtttcaatcaatgataaaatgaacttacggccaccagaacgggataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ttcttcgtaaacagtttcaatcaatgataaaatgaacttacggccaccagaacgggataa 683
Query: 301 aactgtacgatggtccactgaagaactcaaagcataagatgatcttcttcttttggcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aactgtacgatggtccactgaagaactcaaagcataagatgatcttcttcttttggcatt 623
Query: 361 gatatccacgccttgcaaagattcagacacctcatctagggctgagcttgattgagaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gatatccacgccttgcaaagattcagacacctcatctagggctgagcttgattgagaaga 563
Query: 421 caacgctggagaatcctctttgtgagttgggatttgtaattgctttcttggagcttttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 caacgctggagaatcctctttgtgagttgggatttgtaattgctttcttggagcttttga 503
Query: 481 gttcctagtagctgagattttacccaagacaccctctttggcattatccaacccaccctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gttcctagtagctgagattttacccaagacaccctctttggcattatccaacccaccctt 443
Query: 541 acttttctgtggtctttctttcgcaacggtaacagccttctcgacctgagattgcattct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acttttctgtggtctttctttcgcaacggtaacagccttctcgacctgagattgcattct 383
Query: 601 ctgtaacgcgacgtcagttctcttgtaacgacctcctaatctgtgacccgagtgctctaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctgtaacgcgacgtcagttctcttgtaacgacctcctaatctgtgacccgagtgctctaa 323
Query: 661 atatgctttagcaatagaatccttattagattcagatggagtgacacccctttgaatgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atatgctttagcaatagaatccttattagattcagatggagtgacacccctttgaatgat 263
Query: 721 tttataaacttggaagtag 739
|||||||||||||||||||
Sbjct: 262 tttataaacttggaagtag 244
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5750
Number of Sequences: 1807
Number of extensions: 5750
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 739
length of database: 10,358,551
effective HSP length: 16
effective length of query: 723
effective length of database: 10,329,639
effective search space: 7468328997
effective search space used: 7468328997
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)